Class Summary 
AtmGibbsSampler 
Generated Gibbs sampler for the ATM model. 
AtmipGibbsSampler 
Generated Gibbs sampler for the ATM model. 
AtmpGibbsSampler 
Generated Gibbs sampler for the ATM model. 
Auxiliaries 
static auxiliary functions 
Backup 

BerndParallelFor 

BetaTest 
tests the simplification of beta function ratios. 
GcjTest 

GibbsSampler 

Hpam1GibbsSampler 
Generated Gibbs sampler for the HPAM1 model. 
Hpam1iGibbsSampler 
Generated Gibbs sampler for the HPAM1 model. 
Hpam1ipGibbsSampler 
Generated Gibbs sampler for the HPAM1 model. 
Hpam1pGibbsSampler 
Generated Gibbs sampler for the HPAM1 model. 
Hpam2GibbsSampler 
Generated Gibbs sampler for the HPAM2 model. 
Hpam2iGibbsSampler 
Generated Gibbs sampler for the HPAM2 model. 
Hpam2ipGibbsSampler 
Generated Gibbs sampler for the HPAM2 model. 
Hpam2pGibbsSampler 
Generated Gibbs sampler for the HPAM2 model. 
JitSampler 
Justintime Sampler. 
LatexLetters 

Ldac5GibbsSampler 
Generated Gibbs sampler for the LDAC5 model. 
Ldae3GibbsSampler 
Generated Gibbs sampler for the LDAE3 model. 
LdaGibbsSampler 
Generated Gibbs sampler for the LDA model. 
LdaGibbsSampler1049 
Generated Gibbs sampler for the LDA model. 
LdaGibbsSerB 
LDA Gibbs sampler: (m,k  alpha), (k,t  beta) 
LdaKernelGenerator 
reimplementation of generator code for multisequence and sparsity support. 
MixEdge 
represents a mixture edge 
MixItem 

MixNet 
represents a mixture network, a bipartite BN with variable nodes turned into
edges and parameters and priors turned into nodes. 
MixNetKernelGenerator 
reimplementation of generator code for support of: multiple sequences, sparse
label indexing, parallelisms, fast sampling state, independent samplers and
novel C3 and C5 mixnet structures. 
MixNetParser 
parse a mixnet script. 
MixNode 
represents a mixture node. 
MixNodeFastSerial 
represents a mixture node with fast serial sampling state 
MixSequence 
sequence along which variables are sampled 
Pam5GibbsSampler 
Generated Gibbs sampler for the PAM5 model. 
Pam5iGibbsSampler 
Generated Gibbs sampler for the PAM5 model. 
Pam5ipGibbsSampler 
Generated Gibbs sampler for the PAM5 model. 
Pam5pGibbsSampler 
Generated Gibbs sampler for the PAM5 model. 
PamGibbsSampler 
Generated Gibbs sampler for the PAM model. 
ParallelFor 
ParallelFor implements what in OpenMP is called a parallel for loop, i.e., a
loop that executes in parallel on several threads with a barrier (join) at
the end. 
TestMixNets 
