org.knowceans.topics.cgen
Class AtmGibbsSampler

java.lang.Object
  org.knowceans.topics.cgen.AtmGibbsSampler

public class AtmGibbsSampler
extends java.lang.Object

Generated Gibbs sampler for the ATM model. author--topic model, testing abserved nodes Mixture network specification:

 m >> (am[m]) >> x[m][n]
 x[m][n] >> (theta[x] | alpha) >> z[m][n]
 z[m][n] >> (phi[z] | beta) >> w[m][n]
 
 
 elements:
 
 document m
 type: {ROOT|E1SINGLE}
 parents: (root)
 children: am
 range: M
 ----
 doc-author (am[m])
 type: {VISIBLE|SEQUENCE|C1ROOT}
 parents: m
 children: x
 components: am, domain: M, range: am[m].length in A
 counts: nmx, sum: null
 index: m, selector: null
 label node (sparse indexing)
 ----
 author x[m][n]
 type: {HIDDEN|E1SINGLE}
 parents: am
 children: theta
 range: A
 ----
 author-topic (theta[x] | alpha)
 type: {TOPIC|C1ASINGLE}
 parents: x
 children: z
 components: theta, domain: A, range: K
 counts: nxz, sum: nxzsum
 index: x, selector: null
 hyperparams: alpha, dimension 1, fixed: true
 ----
 topic z[m][n]
 type: {HIDDEN|QFIXED|E1SINGLE}
 parents: theta
 children: phi
 range: K
 ----
 topic-word (phi[z] | beta)
 type: {TOPIC|C1ASINGLE}
 parents: z
 children: w
 components: phi, domain: K, range: V
 counts: nzw, sum: nzwsum
 index: z, selector: null
 hyperparams: beta, dimension 1, fixed: true
 ----
 word w[m][n]
 type: {VISIBLE|E1SINGLE}
 parents: phi
 children: (leaf)
 range: V
 ----
 sequences:
 
 words [m][n]
 parent: (root), children: []
 edges: m x z w
 authors [m][j]
 parent: (root), children: []
 edges:
 
 

Author:

gregor heinrich (via MixNetKernelGenerator)

Field Summary

(package private) int	A
(package private) double	alpha
(package private) double	alphasum
(package private) int[][]	am
(package private) int[][]	amq
(package private) double	beta
(package private) double	betasum
(package private) int	iter
(package private) int	K
(package private) int	M
(package private) int	Mq
(package private) int	niter
(package private) int[][]	nxz
(package private) int[]	nxzsum
(package private) int[][]	nzw
(package private) int[]	nzwsum
(package private) double[][]	phi
(package private) double[][]	pp
(package private) java.util.Random	rand
(package private) double[][]	theta
(package private) int	V
(package private) int[][]	w
(package private) int	W
(package private) int	Wa
(package private) int	Waq
(package private) int[][]	wq
(package private) int	Wq
(package private) int[][]	x
(package private) int[][]	xq
(package private) int[][]	z
(package private) int[][]	zq

Constructor Summary

AtmGibbsSampler(int[][] am, int[][] amq, int Amax, int A, double alpha, int K, double beta, int[][] w, int[][] wq, int V, java.util.Random rand)

Method Summary

void	estAlpha()
void	init()
void	initq()
static void	main(java.lang.String[] args)
double	ppx()
void	run(int niter)
void	runq(int niterq)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

rand

java.util.Random rand

iter

int iter

niter

int niter

M

int M

Mq

int Mq

am

int[][] am

amq

int[][] amq

x

int[][] x

xq

int[][] xq

A

int A

nxz

int[][] nxz

nxzsum

int[] nxzsum

alpha

double alpha

alphasum

double alphasum

theta

double[][] theta

z

int[][] z

zq

int[][] zq

K

int K

nzw

int[][] nzw

nzwsum

int[] nzwsum

beta

double beta

betasum

double betasum

phi

double[][] phi

w

int[][] w

wq

int[][] wq

V

int V

W

int W

Wq

int Wq

Wa

int Wa

Waq

int Waq

pp

double[][] pp

Constructor Detail

AtmGibbsSampler

public AtmGibbsSampler(int[][] am,
                       int[][] amq,
                       int Amax,
                       int A,
                       double alpha,
                       int K,
                       double beta,
                       int[][] w,
                       int[][] wq,
                       int V,
                       java.util.Random rand)

Method Detail

main

public static void main(java.lang.String[] args)

init

public void init()

initq

public void initq()

run

public void run(int niter)

runq

public void runq(int niterq)

estAlpha

public void estAlpha()

ppx

public double ppx()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object