A C E F G H I L M N O P R S T V

M

main(String[]) - Static method in class org.knowceans.mcl.MarkovClustering

test the MCL algorithm with the matrix loaded from the file in the argument.

main(String[]) - Static method in class org.knowceans.mcl.MatrixLoader

MarkovClustering - Class in org.knowceans.mcl

MarkovClustering implements the Markov clustering (MCL) algorithm for graphs, using a HashMap-based sparse representation of a Markov matrix, i.e., an adjacency matrix m that is normalised to one.

MarkovClustering() - Constructor for class org.knowceans.mcl.MarkovClustering

MatrixLoader - Class in org.knowceans.mcl

MatrixLoader loads matrices in simple sparse and dense formats.

MatrixLoader() - Constructor for class org.knowceans.mcl.MatrixLoader

matrixTimes(SparseMatrix) - Method in class org.knowceans.mcl.SparseMatrix

immutable multiply matrix M with this (A) : M * A

max() - Method in class org.knowceans.mcl.SparseVector

maximum element value

maxVLength - Variable in class org.knowceans.mcl.SparseMatrix

mult(int, double) - Method in class org.knowceans.mcl.SparseVector

mutable mult