A C E F G H I L M N O P R S T V

A

add(int, int, double) - Method in class org.knowceans.mcl.SparseMatrix

adds a to the specified element, growing the matrix if necessary.

add(SparseVector) - Method in class org.knowceans.mcl.SparseVector

mutable add

add(int, double) - Method in class org.knowceans.mcl.SparseVector

mutable add

addLoops(SparseMatrix, double) - Method in class org.knowceans.mcl.MarkovClustering

add loops with specific energy, which corresponds to adding loopGain to the diagonal elements.

adjustMaxIndex(int, int) - Method in class org.knowceans.mcl.SparseMatrix

adjusts the size of the matrix.